Discovery analysis of multiple protein marker panels: Optimizing sensitivity and selectivity

M. Athanas1, A, Prakash2, T. Rezai2, B. Krastins2, D. Sarracino2, Kypros Nicolaides3, Ramesh Kuppusamy3, Mary F. Lopez2
1VAST Scientific, Cambridge, MA, USA, 2Thermo Fisher Scientific, BRIMS, Cambridge, MA, USA, 3Fetal Medicine Foundation, London, UK

1VAST Scientific, Cambridge, MA; 2University of Washington, Seattle, WA; 3ThermoFisher Scientific, Cambridge, MA; 4ThermoFisher Scientific, Somerset, NJ; 5Harvard University, Boston, MA

Mass Spectrometry Application to the Clinical Lab 2010 Conference Poster

Analysis of multiple protein marker panels: Optimizing sensitivity and selectivity

M. Athanas1, A, Prakash2, T. Rezai2, B. Krastins2, D. Sarracino2, Kypros Nicolaides3, Ramesh Kuppusamy3, Mary F. Lopez2
1VAST Scientific, Cambridge, MA, USA, 2Thermo Fisher Scientific, BRIMS, Cambridge, MA, USA, 3Fetal Medicine Foundation, London, UK

1VAST Scientific, Cambridge, MA; 2University of Washington, Seattle, WA; 3ThermoFisher Scientific, Cambridge, MA; 4ThermoFisher Scientific, Somerset, NJ; 5Harvard University, Boston, MA

International HUPO 2009 Conference Poster

Label Free Differential Analysis: An Iterative Approach to Increased Coverage, Improved Statistics and Results

Michael Athanas1; Michael J. Maccoss2; Amol Prakash3; Lukas Kall2; Daniela Tomazela2; Brendan Maclean2; Taha Rezai3; Bryan Krastins3; David Sarracino3; Scott Peterman4; Alejandra Garces5; Sarah Fortune5; Mary F Lopez3

1VAST Scientific, Cambridge, MA; 2University of Washington, Seattle, WA; 3ThermoFisher Scientific, Cambridge, MA; 4ThermoFisher Scientific, Somerset, NJ; 5Harvard University, Boston, MA

ASMS 2009 Conference Poster

Performance characteristics of an FT MS-based workflow for label-free differential MS analysis of human plasma: standards, reproducibility, targeted feature investigation, and application to a model of controlled myocardial infarction

Jennifer Sutton, Dr. , Tori Richmond, Xu Shi, Michael Athanas, Celeste Ptak, Robert Gerszten, Leo Bonilla

PROTEOMICS - Clinical Applications
Volume 2 Issue 6, Pages 862 - 881

Application of label-free quantitative differential analysis for biomarker discovery in Tuberculosis mycobacterium

Michael Athanas1, Bryan Krastins2 , David Sarracino2 , Amol Prakash2,  Taha Rezai2, Mary F Lopez2, Alejandra Garces3, Sarah Fortuane3

1VAST Scientific, Cambridge, MA ,2Thermo Fisher Scientific, Cambridge, MA;  3 Harvard University, Boston, MA

HUPO 2009 Conference Poster

Silent Hammer

Paula Pomianowski, Richard Delanoy, Jonathan Kurtz, Gary Condon

Lincoln Laboratory Journal: Volumn 16, November 2, 2007

Quantitative, Top-Down Identification of Differentially Expressed, Endogenous Peptides in Human Serum: A Robust, Sensitive and Novel Discovery Workflow

David A. Sarracino, Bryan Krastins, Michael Athanas, Amol Prakash, Taha Rezai, Kypros Nicolaides and Mary F Lopez .

Poster: Human Proteome Organisation Conference - 2008

Development of a Novel Label-Free Differential Analysis Workflow for Protein Biomarker Discovery from Renal Cell Carcinoma Tissue Interstitial Fluid

J. N. Sutton, S. E. Abbatiello, B. L. Hood, M. Athanas, R. Dhir, M. Lopez, T. Conrads

Poster: Human Proteome Organisation Conference - 2007

Weak decays of Lambda Helium 4 Hypernuclei

J. D. Parker, M. J. Athanas, P. D. Barnes, S. Bart, B. Bassalleck, R. Chrien, G. Diebold, G. B. Franklin, K. Johnston, P. Pile, B. Quinn, F. Rozon, R. Sawafta, R. A. Schumacher, R. Stearns, I. Sukaton, R. Sutter, J. J. Szymanski and V. J. Zeps

arXiv:0705.3311 (May 2007)